Under mounting criticism over her lack of transparency, Clinton has agreed to release additional medical information in coming days, a move her aides said they hope will quiet lingering concerns about her health. Rumours about the 68-year-old candidate have swirled for weeks in the conservative media, stoked by Trump and his surrogates.
Had Clinton heeded her doctor's advice, she would not have gone to a glitzy fundraiser where she let her guard down and inartfully talked about Trump's supporters, nor would she have been spotted collapsing on Monday as she was rushed out of a 9/11 memorial ceremony.
But Clinton's instinct was to keep her pneumonia largely a secret, according to interviews today with Clinton campaign officials who gave accounts of the events. She left Bardack's office and headed into Manhattan to convene a meeting of national security advisers. Then she parried questions at a news conference. And then she mingled with donors at the fundraiser.
That's where the problems began. Before a friendly audience that included singer Barbra Streisand, Clinton jokingly said that "half" of Trump's supporters were in a "basket of deplorables - racist, sexist, homophobic, xenophobic, Islamophobic, you name it". The remark allowed Trump and his allies to paint Clinton as out-of-touch and elitist, and she expressed contrition on Sunday.
Then yesterday, Clinton's plan to "power through," as her top aides later called it, finally unravelled. She abruptly left the September 11, 2001, memorial ceremony in Lower Manhattan and ditched her travelling press corps. She felt overheated and dizzy. A video a witness recorded on his cellphone showed her stumbling and wobbling, her knees buckling as Secret Service agents lifted her into a black van.
From the van, Clinton made phone calls, including to aide Huma Abedin. Clinton did not think she needed to go to a hospital, so the agents rushed her to daughter Chelsea's apartment a few kilometres away.
There, in the air conditioning, Clinton drank Gatorade and cooled down. "She was telling anyone who would listen that she was fine," spokesman Brian Fallon said, adding that Clinton played with granddaughter Charlotte. She also called Bardack, who a few hours later would treat her at the candidate's Chappaqua home.
But outside, there was a major media storm. For 90 minutes, the public was in the dark about Clinton's whereabouts - and for most of the day, about her illness. It was not until 5.15pm local time that her campaign issued a statement from Bardack about Clinton's pneumonia diagnosis.
Some of Clinton's allies voiced concern about her lack of transparency, which has been an issue throughout her campaign and feeds the perceptions many voters have of her as untrustworthy.
"Antibiotics can take care of pneumonia. What's the cure for an unhealthy penchant for privacy that repeatedly creates unnecessary problems?" tweeted David Axelrod, President Barack Obama's former chief strategist.
At the White House, press secretary Joshua Earnest barely disguised his frustration during his press briefing today, a day before Obama is set to campaign for Clinton in Philadelphia.
"There's a reason that we have had a long tradition in this country of individual candidates disclosing information about their health to the American public before the election," Earnest said, noting that Obama did so as a candidate, and has continued to do so as president, to underscore the point.
Because Trump and Giuliani had raised the issue of her health so brutally and so unfairly, they were inclined to try to gut it out and not disclose
Former Ohio state senator Nina Turner, a prominent supporter of Senator Bernie Sanders in the Democratic primary race, said: "People get sick. . . . It's okay not to feel well. It's all about the cover up."
Clinton's aides readily acknowledged that they took too long in revealing the candidate's whereabouts and medical condition. But they did not second-guess Clinton's decision to stick to her schedule, and they argued there was no expectation that she reveal the diagnosis any earlier because the pneumonia had not affected her public activities until Monday.
"She didn't see a need to tell people if she was going to continue her schedule," said Jennifer Palmieri, Clinton's communications director. "She felt well enough to keep going. Power through. But obviously that didn't work out."
It was unclear how prepared Clinton's staff was to manage the announcement of her pneumonia. Palmieri and Fallon refused to specify how many aides knew about the diagnosis or even whether they themselves were aware, saying only that "senior staff knew".
It also was unclear whether Clinton's running-mate, Senator Tim Kaine was in the know. Kaine declined to say when he learned of Clinton's pneumonia diagnosis but said he exchanged emails with her shortly after yesterday's incident.
"Within a few minutes after I heard the news, I had reached out to communicate to her, and she reached right back out to me and said, 'I'm going to be fine,' " Kaine told reporters.
Some of Clinton's top aides have also got sick over the past two weeks, most with a virus that is separate from Clinton's ailment, aides said. The victims include campaign manager Robby Mook and policy adviser Jake Sullivan, as well as Palmieri and Fallon.
Former Pennsylvania governor Edward Rendell said the campaign's delay in revealing Clinton's pneumonia was regrettable.
"They probably should have initially acknowledged her initial diagnosis," Rendell said. "But because Trump and [former New York Mayor Rudy] Giuliani had raised the issue of her health so brutally and so unfairly, they were inclined to try to gut it out and not disclose."
Clinton was scheduled to fly to California today for two days of fundraising and to give a major economic address. Bardack recommended that she stay home to recover. Talking with her advisers yesterday Clinton insisted upon making the trip, but aides overruled her, Fallon said. "Her natural impulse is to keep going," he said.
With the trip cancelled, Clinton spent today at home in Chappaqua and tweeted, "I'm feeling fine and getting better." In a second tweet, she wrote, "Like anyone who's ever been home sick from work, I'm just anxious to get back out there."
Former President Bill Clinton plans to appear in his wife's stead at two star-studded fundraisers tomorrow in Beverly Hills. He also will sub in for her at a campaign event in Nevada on Thursday, aides said.
Bill Clinton told Charlie Rose of CBS News that his wife has "worked like a demon". Asked if she could stay off the campaign trail for weeks, Clinton responded: "No, not a shot. I'll be lucky to hold her back another day".
Trump has sought to take maximum advantage. He has been closely monitoring news about Hillary Clinton's health, but he refrained from tweeting about it yesterday and in interviews today was uncharacteristically restrained.
Trump said he had a physical last week - "I feel great," he told Fox News Channel - and vowed to release the results on Friday.
With Clinton resting, Trump launched some of his sharpest attacks yet against her. He said in a speech in Baltimore that her "deplorables" comment "disqualifies" her from being president - and that if she does not retract it, "I don't see how she can credibly campaign any further". Trump's campaign also released a television advertisement about Clinton's remark that will air in four battleground states.
Trump's advisers and allies think this is a potential turning point in the race against Clinton and that with a disciplined approach, they can keep the Democratic favourite on the defensive heading into the September 27 debate.
"This moment is shaping up to be a perfect storm for the Clinton campaign, something they have feared all along," said Scott Reed, a veteran GOP strategist. "Democrats have to be asking themselves if this is the beginning of the end."
Few Democrats shared that outlook, arguing that the media scrutiny on Clinton was unfair and sexist and that she would quickly bounce back politically.
"The debates are the perfect antidote," Democratic operative Bill Burton said. "If she goes out and performs well in the debates, with the energy and vigour that everybody anticipates, it will put a lot of this to bed."
The campaign turned the illness into a fundraising pitch, telling supporters in an email that "today is the perfect day to step up and let Hillary know you've got her back".
But it interrupted plans for a coordinated series of policy speeches by Clinton as well as appearances by Obama, Vice-President Joe Biden and other high-profile surrogates over the next two weeks. The goal had been to break through the wall of news coverage about Trump.
"We've lost a couple of days, but we're going to pick that effort back up," Palmieri said. "We have more than enough time to compensate for the two days we have lost. You get back out there, and it's a new day."
She still plans to give the speeches - covering the "inclusive economy," goals for national service, and help for children and families - before the debate, Palmieri said.
"She's a tough lady," said Clinton supporter Lou D'Allesandro, a state senator in New Hampshire. "She's got the courage of a lion. She'll be back on her feet in no time."