"We're not aware of anything like this anywhere else in the country," he said.
"We don't know where their energy's coming from."
He said anemones are voracious feeders and would eat zooplankton out of the water column, so researchers were questioning how such a large and densely packed anemone bed was finding all the food it needed to survive.
"You don't normally see anemones of that size in beds of that size . . . that's why that bed is nationally significant."
Only about five or six of the country's 44 marine reserves have been properly mapped, so Mr Gardner said there could well be other beds of this size, but they simply hadn't been discovered yet.
Other finds included a large rhodolith bed.
Rhodoliths are plants which need clear, clean water and sunlight for photosynthesis.
Often rhodolith beds are found badly degraded these days as sediment from construction, forestry and agriculture slips into the water, but the bed discovered around Kapiti Island is in surprisingly good order, Mr Gardner said.
The group also continues to search for an area of black coral known to be around the island in previous years.
All corals are protected in New Zealand.
"I think we need to be really, really clear that there is no plan right now, at least as far as I'm aware, of extending the marine reserve. If that was to happen it would probably need to be led by the community."
What the research gave them was a good baseline so they could know what marine life was there, and be able to compare it in later years. Mapping of this extent has not been done in the area before.
For the people, the information "means everything and it means nothing".
"It depends on how you relate to what's going on in the sea. As a minimum, this work we're doing is a really valuable baseline."
He wanted to create a sense of ownership among locals.
"There's this sense of what we have in our watery backyard is different from what other people have got.
"It's ours, it's special, and we need to protect it because if we don't protect it, nobody else can, nobody else will."
He said the mapping cost about $120,000 but the information still needed to be converted into a digital format, a six-month job which would cost about $250,000.
Greater Wellington Regional Council aquatic ecosystems and quality team leader Megan Oliver said the information was "incredibly valuable".
"Half our battle is knowing what we've got," she said.
The news of the anemone beds was exciting and could prompt council to sit down with other involved agencies and look at possible restrictions that could be put in place to protect the marine life.
For example, the Ministry for Primary Industries or Maritime NZ could look into putting in an anchor exclusion zone to prevent damage to any of the habitats.
Council could address the information in its next regional plan, and restrictions might involve requiring special processes for consents for land-based activities that could affect the marine environment.