Islamabad won the game by seven wickets.
Sharjeel (27) was part of the Pakistan team that recently toured Australia, and featured in a test and all five one-day internationals. He has totalled 25 one-day internationals and 15 Twenty20s.
Latif (31) was part of Pakistan's World Twenty20 squad in India last year and has played five one-day internationals and 13 Twenty20s.
Neither face the Black Caps in their two-test series in New Zealand late last year.
"It would not be appropriate to comment on the specifics of the case," said Pakistan Super League chairman Najam Sethi. "however this investigation is a clear demonstration of our determination to drive corruption out of our sport.
"We will not tolerate any form of corrupt activity and as this investigation proceeds, we will not hesitate to take further decisive action as appropriate."
PCB chairman Shaharyar Khan said players should know the pitfalls of corruption.
"Under no circumstances will the PCB condone actions of a few individuals to bring disrepute to the game of cricket or taint the image of Pakistan," he said.
Khan later told media gathered at Karachi airport that evidence of wrongdoing exists.
"We have evidence against the players and we are into further investigation," Khan said.
"Sharjeel was on my flight back from Dubai, but we did not meet."
Pakistan cricket has been rocked by fixing scandals over the past several years. Former captain Salim Malik and Ataur Rehman were banned for life, after an investigation in 2000.
Malik was punished for offering Australian trio Shane Warne, Tim May and Mark Waugh a bribe to underperform during their visit to Pakistan in 1995.
In 2010, then-test captain Salman Butt, Mohammad Amir and Mohammad Asif were jailed and banned for five years for spot-fixing, while leg-spinner Danish Kaneria was banned for life in a spot-fixing case in 2012.
The suspension may effectively end Sharjeel's contract with English county side Leicestershire to play the Twenty20 Blast tournament later this year.