"I'm happy with the title. Whenever there is a title in play what counts is winning it," Barcelona coach Gerardo Martino said. "But as far as the team goes, I want to see more. Above all in these types of games, we need to find more precision and the ability to create more spaces."
Messi was back for Barcelona after missing one game due to a left thigh injury sustained in the opening Super Cup match last week. But the four-time world player of the year was not his usual dynamic self, lacking his spark and finishing touch. He uncharacteristically scuffed a close-range shot off a pass from Sergio Busquets to start his off night.
Martino gave Neymar his first start in his fourth official game for Barcelona since his 57-million move from Santos in June.
Messi and Neymar had only previously been on the pitch together for seven minutes because Martino said he wanted to ease the 21-year-old Brazil striker into his new team. But those eager to see the two together were disappointed. While Messi was below par, Neymar wasn't able to exploit his speed and dribbling against Atletico's physical defense.
"I think that individually they both played well," Martino said of the pair. "It's true they didn't find one another or combine much. With Neymar playing on the left and Messi tending to move out to the right, they are far away. But I don't doubt they will find each other."
Barcelona may have increased its record of Spanish Super Cups contested between the league and Copa del Rey champions to 11, but its performance over both legs only raised questions of its transition under Martino since July.
Atletico, meanwhile, kept building on its good start to the Spanish league and its preparations for a return to the Champions League.
"We played both games very well," said Atletico coach Diego Simeone, who guided his team to the Copa last May. "We had more chances than they did. I am very proud of my players because we were competitive across both legs with Barcelona, which is the best team in the world."
Atletico's plan to relinquish the ball and look to hit on the break worked in the first half.
Diego Costa produced Atletico's first chance on goal in the 35th when he passed for David Villa to set up Jorge "Koke" Resurreccion, only for the young midfielder to weakly shoot into the Valdes' arms.
Atletico missed another chance to go ahead in the 42nd when Arda Turan drew an excellent save from Valdes.
Needing to score to offset Barcelona's away-goal advantage, Atletico dictated the pace early in the second half and shifted the action to Barcelona's area. Valdes was called upon to make another one-armed save to keep out Villa's curling effort in the 56th.
Martino sent Pedro Rodriguez on in the 65th to lift his team, and even though Neymar wasted Dani Alves' cross minutes later, the Spanish champions regained control.
Barcelona was further helped when Filipe Luis was sent off, and Pedro appeared to have given Messi the opportunity to ensure the trophy when he earned a foul in the box from Miranda.
But Messi struck his spot kick off the woodwork to the shock of the home fans.
