Each mooring will carry two acoustic devices.
A cetacean and porpoise detector (CPOD) will record detections of the high frequency "clicks" the dolphins produce to hunt prey and navigate.
The second device, a soundtrap, will record a subset of both clicks and whistles.
Goetz said the first step was to establish how far offshore they can be detected.
"Acoustic monitoring provides a reliable way to detect the presence of marine mammals over a long time period," she said.
"In terms of Maui dolphins, we really know very little about their seasonal movements, offshore distribution, and ultimately why they appear to be confined to this area.
"They are an endangered animal so anything we can contribute to increasing our knowledge will be very useful."
A photographic survey of Maui dolphins takes place annually, where distinguishing marks and scars are correlated with known animals.
In addition, mark-recapture biopsy surveys to estimate the number of dolphins is conducted across two years, every five years.
The last one was completed in 2016 so the next one will begin in 2020.
While this provided a valuable snapshot at a given time, Goetz said the acoustic survey would add to this data by providing information collected over an entire year.
DoC marine species expert Lauren Boren said the small population size and the nature of the west coast, spotting the dolphins can be difficult.
"We've been trying to increase our 'eyes' on the water by encouraging public sightings of the dolphins, but these acoustic moorings will increase our 'ears underwater' and be there listening when we can't be watching.
Data from the moorings will be retrieved every three months but the project will run for 12 months to enable scientists to detect any seasonal variations.
Maui dolphin, a sub-species of the Hector's dolphin and the world's smallest dolphin species, have a rounded black dorsal fin, compared to other dolphins whose fins are shaped like a sickle.
They only live for up to 20 years and are slow to breed.
Females grow up to 1.7m and weigh up to 50kg - males are slightly smaller and lighter.
The Maui dolphin project follows another acoustic monitoring project Goetz is undertaking in Cook Strait where hydrophones have been placed to detect marine mammals.
More than half the world's whale and dolphin species are found in New Zealand waters yet little is known about their migration paths and behaviour.
Preliminary results from this project have revealed recordings of vocalisations from Antarctic blue whales, minke whales and several different beaked whale species that are rarely seen.