Several invasive mangrove seedlings have been deliberately planted in the Ahuriri Estuary, the Department of Conservation says.
DoC said it was concerned by the potentially "catastrophic" discovery, made by local biodiversity champions.
Ahuriri Estuary is an important ecosystem in the region and provides a habitat for endangered species like the kuaka (eastern bar-tailed godwit), spoonbills, dotterels and occasionally terns and herons.
DoC biodiversity senior ranger Denise Fastier said the introduction of mangroves could devastate that habitat.
"The reckless introduction of these plants to Ahuriri Estuary could be catastrophic for the delicate estuarine ecosystem that supports so many threatened species of wading birds."