Four of the men were also charged with dishonestly converting the trust's money.
The summary of facts for Wong-Tong's case outlined intercepted phone calls and text messages.
It said that in a March telephone call between two of those jointly charged with Wong-Tong, one man said he had "booked a van" from Auckland and that the plan was to "come straight back south".
He also said he "had it sorted as he was going to use the Whanau Ora money".
The next day, $10,020 was transferred from the We Against Violence Trust's bank account to that man's personal account.
Over the following three days, the men travelled to Auckland, withdrawing cash along the way from the personal account and picking up another man.
Two of them then travelled south, picking up Wong-Tong during the journey.
Police searched the van on a Cook Strait ferry and seized 3.15kg of cannabis, which, if bought at the going rate at the time, would have cost $24,500, the summary said.
The We Against Violence Trust did work on whanau violence and community support.
Whanau Ora Minister Tariana Turia declined to comment yesterday, saying the matter was still before the courts.
In May, she said she would be surprised if the money allocated through the Government had been misappropriated, because Te Puni Kokori and Whanau Ora had strict eligibility and reporting criteria.
Since then, Te Puni Kokori has declined a request for documents relating to an investigation it did on the trust after the news of the alleged misappropriation.
Yesterday, a spokeswoman said the ministry was assisting police. She declined to comment further.
Wong-Tong will be sentenced on October 7.