Auckland would be feeling the brunt of a northeasterly weather system, which hasn't occurred in a long time, MetService Auckland forecaster Georgina Griffiths said.
"We're in for an extremely wet few days."
Auckland could expect between 100mm and 150mm to fall between today and Wednesday, with tomorrow set to be the wettest day of the week.
The Christchurch City Council has installed flood mitigation pump operations in the Flockton and Dudley Creek areas ahead of the weather system that is moving in today.
Mayor Lianne Dalziel said the pumps would reduce the flood risk to the residents in vulnerable parts of Christchurch.
"Even if the expected forecast doesn't arrive, this will be a good test of the Taskforce's flood mitigation deployment plans", she said.
At midday no rain had fallen in Christchurch, and 40 to 45mm were forecast to fall before Wednesday.
Surface flooding and slips could occur in Northland due to the heavy rain, where the rain has already been falling today, Civil Defence Northland said.
Northland CD Emergency Management Group spokesman Graeme MacDonald said tomorrow afternoon was expected to be the period of most concern.
He said Kaikohe had 100mm of rain fall by midday, and Civil Defence was collecting data for other areas in Northland to monitor the situation. The rain was forecast to fall steadily until tomorrow.
Mr MacDonald said possible problems could include rapid rises in rivers and streams, resulting in surface flooding and the possibility of slips.
Northlanders are used to heavy rain causing problems, he said, and should be taking necessary precautions today.
Watch - WeatherWatch: Heavy rain and wind moving in