The Government will meet South Island iwi to recommend splitting the quota between longfin and shortfin eel in an effort to protect the endangered longfin eel.
The move comes in response to a report from the Parliamentary Commissioner for the Environment Dr Jan Wright on the longfin eel.
Dr Wright's investigations into longfin eels found they were in trouble, facing extinction due to vulnerabilities in this lifecycle, when they breed at a late age and leave freshwater for the ocean.
Longfin eel are the largest freshwater eel in the world and are found only in New Zealand.
She has recommended an end to commercial fishing.