The eruptions were very near Ohinemutu Village and were described as geysers of water emerging from the lake.
St Faith's is just metres from the lake edge and the site of the eruptions.
Local resident and councillor Trevor Maxwell said he had seen the activity outside the church last weekend.
"I did speak to the caretaker and he said it's all this rain about, that's why it's still there."
Mr Tangohau said a scientist from GNS told them high lake levels had "further enhanced" the geothermal activity, which had always been present in the area.
The church would not know the extent of the problem until the concrete was pulled up.
"Hopefully by Christmas we might be a bit further down the track.
"We did think the actual stream might be under the church but we won't know until we get the concrete up.
"It could become an insurance issue."
The church had a mitigation plan in place, and was looking at potential solutions including cobblestones or a boardwalk in place of the concrete.