Three Aucklanders died of the flu this year, including two children. The deaths included a 4-year-old boy, a 12-year-old girl and a 77-year-old woman.
Two others are believed to have died in Wellington and Christchurch.
The girl - who had existing health problems - died in September, and was the last person to fall victim to the flu in the Auckland region.
"Because of her underlying condition, it probably pushed the flu to the worst possible outcome," said Dr Sue Huang, principal investigator for the Shivers Project, a five-year influenza monitoring programme in the Auckland region.
Last year, four Aucklanders died of the flu.