"We are talking about an extra couple of days ... I think people would rather us be cautious," he told Heather du Plessis-Allan on Newstalk ZB tonight.
On Northland likely to be in lockdown longer, he said: "There was still a risk up in the North. That might not be as long as Auckland ... but at this point they should be prepared to stay in lockdown for a bit longer".
Hipkins said as the case numbers started to go down again, they needed to check if they were linked to new locations of interest, meaning were they increasing the risk.
When asked if the Government would wait until there were zero cases to bring Auckland out of lockdown, Hipkins said, "no, I wouldn't say that".
When asked if he was worried about essential workers potentially taking the virus out of their work and into their families, Hipkins said he was worried about every new case.
We are not picking up any of evidence that people aren't follow the rules, Hipkins said.
Today's announcement
The Government is taking a cautious approach and has extended the nationwide lockdown - which had been due to expire at 11.59pm tonight - for another four days.
The additional time gives health experts a full 14-day cycle of data and information since the country went into lockdown on Tuesday night last week.
All going to plan, it would then drop to level 3 at 11.59pm on Tuesday, August 31.
STORY CONTINUES AFTER LIVE BLOG
STORY CONTINUES
But Auckland's lockdown - which had been due to expire on Tuesday - would likely remain at level 4 for a fortnight after that, Prime Minister Jacinda Ardern said.
Northland will also stay in alert level 4 well past Tuesday, but it remains to be seen whether it will remain in lockdown for as long as Auckland.
Today a new record number of daily cases was declared - 70, bringing the total number of cases in this outbreak to 347. Nineteen people are in hospital in Auckland.