The young people could be seen grabbing smoking products before fleeing.
Newshub reported the owners had tried to defend their property using a shopping basket. The Herald has been unable to reach the store owners for comment.
A still from the video shows the store left in chaos, with smoking products strewn across the floor.
Police told the Herald in a statement that two people had been arrested following the “alleged burglary”.
Officers responded around 1.42am to reports of the burglary. A number of items were taken and the offenders fled in a vehicle before police arrived, the statement said.
“Shortly after, police arrested two youths. A 16-year-old was charged with burglary, aggravated assault and unlawfully taking a motor vehicle and will appear in Manukau Youth Court today.
“A 13-year-old has been referred to Youth Aid Services.”
The Herald understands the vehicle used was located and recovered from nearby Bairds Rd.
The shop remained taped off by police with a scene guard this morning.