Scientists wanted to move from using the dangerous chemical, which is often used to preserve bodies in medical laboratories, to a natural alternative.
"The lemon juice makes a much more safe and efficient way for us to be able to process our sperm in our laboratory,'' Mr McArthur said.
"The benefit, not just for our laboratory but all laboratories in Australia and globally, is that we take a potentially harmful chemical out of our labs.
"In those labs we have sperm samples that are going to be used in the production of embryos, so any time that we can make that system safer is of benefit to our patients.''
However, Mr McArthur said the sperm used to fertilise embryos never comes into contact with formaldehyde, which is simply used to analyse men's sperm for deficiencies before assisted reproductive therapy begins.
Male infertility is the underlying cause for about 40 per cent of couples who have trouble conceiving.
The 18th century lover Casanova was said to have discovered the contraceptive qualities of lemons, using half a squeezed lemon as a uterine cap.
Lemon juice was also thought to be used as a contraceptive by Mediterranean women about 300 years ago.
The results of Genea's study are to be presented at the Fertility Society of Australia annual scientific meeting in Auckland next week.
The latest figures on assisted reproductive technology (ART) in Australia and New Zealand, released on Friday, showed there were about 56,500 treatment cycles performed in Australia and 5,300 in New Zealand in 2010.
This was a fall of about 13 per cent for Australia and one per cent for New Zealand, according to the Australian Institute of Health and Welfare.
The drop in Australia in 2010 coincided with a cap on the amount of money that could be claimed back from Medicare for fertility treatment.
About 12,100 babies were born from the ART treatments in 2010 and almost three quarters were full-term single births of normal birthweight.
- AAP
