"Some of this variance is expected to be timing differences, which are expected to reverse out at the next GST filing due date in January."
The Treasury officials were more unsure of the increase in source deductions, saying it was too early to say whether that was monthly volatility.
The November Crown accounts are the first to capture the new administration, which took office in late October.
Finance Minister Grant Robertson outlined the numbers behind the government's 100-day plan at the December half-year fiscal and economic update, projecting smaller surpluses than his predecessor over the next two years before generating bigger ones at the end of the forecast horizon.
"While it's too early to fully establish whether all of this positive variance will remain through the year, some of it is expected to remain," Robertson said in a statement.
"The numbers are an initial sign of how businesses have been performing and how consumers have been spending in recent months."
The accounts show net debt at $61.8b, or 22.2 per cent of gross domestic product, down from $63.45b, or 24.8 per cent of GDP, and some $700m below forecast with a smaller cash deficit than expected of $2.9b and more currency in circulation, which lifts available financial assets.
Total capital commitments stood at $19.79b as at November 30, up from $18.29b a year earlier, of which $6.96b is earmarked for state highways and $3.12b for land and buildings. Robertson has signalled capital investment as a key focus for future budgets with some $41.7b of spending expected over the next five years.
The operating balance, which includes unrealised movements in the value of the Crown's investment portfolio, was a surplus of $2.39b, beating a forecast surplus of $1.65b, bolstered by $3.9b of investment gains recovered in the New Zealand Superannuation Fund and Accident Compensation Corp portfolios.
That was offset by a $1.4b actuarial loss registered on ACC's long-term liability, which was valued at $40.91b as at November 30.
The Crown's net worth was $113.02b as at November 30, up from $94.1b a year earlier.