The bank's Japan unit, where much of the manipulation took place, entered a plea to one count of wire fraud in an agreement with the US Justice Department.
The Justice Department said two former UBS senior traders, Tom Alexander William Hayes, 33, of Britain, and Roger Darin, 41, of Switzerland, will be charged with conspiracy, while Hayes also will be charged with wire fraud in New York federal court. Justice Department officials said they believed the two men were in Britain and Switzerland, and would be seeking their extradition.
UBS will pay $1.2 billion of its fine to the Justice Department and US Commodity Futures Trading Commission. The CFTC will get $700 million, the largest fine it ever ordered. The remaining $300 million will go to regulators in Britain and Switzerland.
As a result of the fines, litigation, unwinding of real estate investments, restructuring and other costs, UBS said it expects to lose between 2 billion and 2.5 billion Swiss francs ($US2.2 billion to $2.7 billion) in the fourth quarter. Nevertheless, the Zurich-based bank maintained that it "remains one of the best capitalized banks in the world."
UBS shares closed down 0.3 per cent at 15.20 francs on the Zurich exchange.
The LIBOR scandal is likely to make headlines again in coming months. Other big global banks are also being investigated in the LIBOR scandal and are expected to be fined.
The UBS penalty is more than triple the $450 million in fines imposed by American and British regulators in June on Barclays. The scandal led to the departure of Chief Executive Bob Diamond.
UBS said some of its personnel had "engaged in efforts to manipulate submissions for certain benchmark rates to benefit trading positions" and that some employees had "colluded with employees at other banks and cash brokers to influence certain benchmark rates to benefit their trading positions."
Britain's financial regulator called the misconduct by UBS "extensive and broad," with the rate-fixing carried out from UBS offices in London and Zurich.
Different desks were responsible for different rate submissions. At least 2,000 requests for inappropriate submissions were documented. An unquantifiable number of oral requests, which by their nature would not be documented, were also made, the UK`s Financial Services Authority said.
"Manipulation was also discussed in internal open chat forums and group emails, and was widely known," the FSA said. "At least 45 individuals including traders, managers and senior managers were involved in, or aware of, the practice of attempting to influence submissions."
Joe Rundle, head of trading at London-based ETX Capital, said the case exposes "just how brazen and arrogant" the UBS traders were while collaborating with "corrupt external brokers."
Sergio Ermotti, who was appointed CEO of UBS in November 2011 in the wake of a major trading scandal, said the misconduct does not reflect the bank's values or standards.
In an interview with Swiss TV, Ermotti said the bank let go of 36 employees involved in the scandal over the past 18 months and learned some clear lessons from it mainly that "we had to strengthen our controls."
"We are on our way to finding solutions to some of the problems and there are some other items that remain unresolved," he told the German-speaking public broadcaster SRF. "We have to recognize our failures and learn from them, but also look ahead."
With more than 2.2 trillion Swiss francs ($US2.4 trillion) in invested assets, UBS is one of the world's largest managers of private wealth assets. At last count, the bank had 63,745 employees in 57 countries and said it aims for a headcount of 54,000 in 2015.
Along with Credit Suisse, the second-largest Swiss bank, UBS is on the list of the 29 "global systemically important banks" that the Bank for International Settlements the central bank for central banks considers too big to fail.
It's not the first time that UBS has fallen afoul of regulators. In 2009, US authorities fined UBS $780 million for helping US citizens avoid paying taxes.
The US government has since been pushing Switzerland to loosen its rules on banking secrecy. The country has been trying to shed its image as a tax haven, signing deals with the US, Germany and Britain to provide greater assistance to foreign tax authorities seeking information on their citizens' accounts.
Ermotti has called Switzerland's tax disputes with the US and some European nations "an economic war" putting thousands of jobs at risk.
In September 2011, UBS revealed that unauthorized trades in London by a 32-year-old employee, Kweku Adoboli, had cost it more than $2 billion, the biggest ever fraud at a bank in Britain.
Britain's financial regulator fined UBS, saying its internal controls were inadequate to prevent Adoboli, a relatively inexperienced trader, from making vast and risky bets. Adoboli has been sentenced to seven years in prison.