A number of other named executives took similar pay cuts in the latest year in which the bank reported a 7 per cent drop in annual net profit to A$6 billion.
About a third of ANZ's shareholders voted against the bank's remuneration report at last year's AGM.
Gonski said the board "took this very seriously" and that ANZ had responded to shareholder concerns in a number of ways, including cutting the remuneration of senior executives.
Elliott said the New Zealand operations had delivered "another solid underlying result" but face "challenges" as a result of the Reserve Bank of New Zealand's decision to require ANZ and the other three major Australian-owned banks to lift their capital.
ANZ has said it will need to find about A$3b in fresh equity in addition to the A$1.5b in profits kept in NZ since the proposals were announced.
Elliott reiterated that the bank is "well-placed to meet this challenge without the need to raise additional capital."
Deciding to part company with former NZ chief executive David Hisco was "tough" but "the right decision and sent the right message to our people."
Hisco's departure came after concerns about his personal expenses. The Financial Markets Authority has said that ANZ Bank should have treated the sale of an Auckland house to Hisco's wife in 2017 as a related-party transaction which should have been disclosed in ANZ's 2017 financial statements.
The property at 269 St Heliers Bay Road was sold to Hisco's wife, Deborah Veronica Walsh, for $6.9m when QV's valuation of the property at the time of sale was $10.75m.
Elliott also told the meeting ANZ estimates it has more than 3.4 million customer bank accounts that need fixing in the wake of Australia's royal commission into financial services which reported its findings in February this year.
"To date, we've made good on more than one million of these bank accounts. While each issue is unique, on average we have refunded these customers around A$60 each," he said.
"No one is proud of the fact we need to remediate mistakes of the past but we are learning from our failures and strengthening the bank as a result. We're teaching our people about what went wrong and how it affected our customers to ensure we don't make these mistakes again."
In light of Westpac's difficulties relating to more than 23 million transactions that breached Australia's anti-money laundering laws, including facilitating transactions enabling child exploitation in the Philippines, Elliott told the meeting that he isn't aware of any impending litigation from Australia's anti-money laundering agency AUSTRAC.
When it came to question time, Gonski had to withstand plenty of criticism from shareholders, many of them also aggrieved customers and members of ginger group Bank Warriors.
But there were also compliments for individual ANZ staff members who were "fabulous to deal with," for Elliott – "I've admired you for a long time," and for the quality of the bank's annual report.
At the time of writing, ANZ's meeting was continuing.