Niwa fisheries scientist Dr Brit Finucci said New Zealand waters were home to about 113 shark species and their relatives, of which 20 are considered oceanic, meaning they spend most of their time in the open ocean.
Finucci said most of those species were not considered threatened in New Zealand, but rapidly growing research was linking shark movements to environmental changes.
"We don't have that information for New Zealand, and this is something we should start investigating. It is very hard to assess the status of many sharks in our waters because we don't have shark-specific monitoring programmes."
Some data was opportunistically collected either by other research surveys or reported by commercial fishers and fisheries observers.
"For some species we have noted possible declines in recent years, but we are unsure if these trends are a real decline in abundance, a change in the fishery, or a change in animal behaviour."
Recently retired Niwa scientist Dr Malcolm Francis was a member of the IUCN Shark Specialist Group for more than 20 years and was a co-author of the Nature paper, contributing analysis of the blue, mako and porbeagle sharks.
These species are managed under New Zealand's Quota Management System. Another nine oceanic species are protected or managed under the Wildlife Act and Fisheries Act.
The eight remaining New Zealand oceanic species have no specific management.
"New Zealand not only has globally threatened oceanic species, but also some globally highly threatened deep-water species as well. We know these species are very susceptible to population declines because of their biology," Finucci said.
"Niwa has taken on a wide variety of shark research projects in the past including indicator analyses and stock assessments - these are important for monitoring shark populations.
"However, to do this modelling work, and do it well, we still need a lot of fundamental research of species' biology and ecology."
The much-needed research would include mapping critical habitats for populations, particularly nursery areas and pupping grounds, and determining movement patterns of sharks within New Zealand and beyond to inform the best timing of potential closed areas or seasons.
"Sharks have been part of our oceans for millions of years and if they disappear it is likely to be noticed in ways we haven't yet measured."
The Nature paper said that action was needed immediately to prevent shark population collapses and "myriad negative consequences for associated economic and ecological systems".
"There is an urgent need for governments to adopt science-based catch limits for oceanic sharks that are capable of supporting sustainable fisheries, along with by-catch mitigation."
Oceanic sharks found in New Zealand waters:
Oceanic whitetip, Carcharhinus longimanus
Globally critically endangered. New Zealand protected species
Basking shark, Cetorhinus maximus
Globally endangered. New Zealand protected species
Shortfin mako, Isurus oxyrinchus
Globally endangered. Managed under the QMS
Common thresher shark, Alopias vulpinus
Globally vulnerable. No species-specific management in New Zealand
Smooth hammerhead, Sphyrna zygaena
Globally vulnerable. Managed under Schedule 4C of the Fisheries Act 1996