The system measured daytime temperatures, humidity and the number of consecutive days heat is felt, in comparison to historical data.
The heat alert meant MetService would remind residents in areas affected by extreme temperatures that getting too hot can be dangerous.
Temperatures in Rotorua reached a high of 30C on Wednesday. Photo / NZME
"New Zealand is very changeable because it's a narrow strip of land in a large body of water," Lee said.
"We rely on systems. At the moment we are in a La Nina phase and we are expecting high pressure to dominate. It means there is clearer sky and less wind."
Lee said the high-pressure system affecting the country over the last few days came on the heels of a low-pressure system that brought in the humid air.
"Basically [the humidity] hasn't been able to go anywhere."