"They seem to be evolving all the time. They'll try new crop varieties," McIntosh said.
"With maize they pull the shoot out and access the seed underneath.
"With squash, they have taken to eating the leaves and leaving only the stem.
"They seem to be developing a taste for these things. They are even pulling onions out, which was unheard of."
He said his company would now place an employee on the resown sites to scare the birds away three times a day; a tricky task on all their sites, he said.
"There are so many waterways and canals in the Bay. They follow them up and have a feed in the field and go back into them," Mr McIntosh said.
Director John Bostock said the damage was difficult to quantify because pukeko damaged crops throughout the year, pecking holes in squash and pumpkins and feeding on maize.
"We love those birds but they have got to epidemic proportions," he said.
Forest and Bird advocacy manager Kevin Hackwell said the pukeko was adapting to its changing environment. "Unfortunately, 90 per cent of our swamplands have been drained to make way for farms and other developments, so our pukeko have taken up the role as scavengers, sometimes picking on crops and foraging alongside motorways."
The damage wrought is not just for food.
The curious birds have been known to systematically remove rubber bands in nurseries that hold newly budded apple trees in place.
Three years ago, Crown Research Institute Plant and Food in Havelock North were forced to engage a pukeko shooter.
A trial to find an alternative to ozone-depleting gas for soil fumigation was under threat of being compromised due to the birds forcing their way into strawberry enclosures.
The strawberries were protected by two layers of netting, but they were not enough to protect them from the pecking pest, which even nested inside the strawberry patch.
The shooter reported 80 pukeko sightings in just one 4ha Plant and Food orchard block.
On open ground, the birds are difficult to shoot, staying out of shotgun range once wary. The noise of the gun is the main deterrent.
Mr McIntosh said Fish and Game had experienced an increase in requests for out-of-season permits to shoot pukeko, which required consultation with the Department of Conservation.
The pukeko shooting season has been extended by six weeks, opening on May 5 and closing on September 30.