"The pressure of the water made them float and rise."
Little said contractor Fulton Hogan was insured and the engineers were working on the issue.
"The engineers are all over it. It's just more frustration for the contractors, as it would delay installation by a couple of weeks."
The culverts will need to be removed and relaid.
A Wairoa District Council spokesperson wrote on Facebook that its engineering team had "never seen anything like it before".
The uplift pressure of the rain pooling at the bottom of the drain compromised the stability of the culverts causing them to float, in a freak incident.
Last year about 245m of concrete culverting was laid in Kitchener St as part of a Wairoa District Council plan to future-proof the town's stormwater network.